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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
BLCA cis rs9815354 1 rs9869282 chr3:41756064 ULK4 chr3:41288091-42003660:- 0.61 9.48 2.76E-19 Diastolic blood pressure
BLCA cis rs9815354 1 rs9869440 chr3:41763155 ULK4 chr3:41288091-42003660:- 0.63 9.87 1.26E-20 Diastolic blood pressure
BLCA cis rs10935120 1 rs9869981 chr3:134248801 ANAPC13 chr3:134196547-134204865:- 0.49 7.74 9.0E-14 Height
BLCA cis rs10935120 1 rs9869981 chr3:134248801 CEP63 chr3:134204575-134293852:+ 0.23 3.92 0.000106 Height
BLCA cis rs10935120 1 rs9871305 chr3:134213538 ANAPC13 chr3:134196547-134204865:- 0.5 8.09 7.9E-15 Height
BLCA cis rs10935120 1 rs9871305 chr3:134213538 CEP63 chr3:134204575-134293852:+ 0.25 4.43 1.21E-5 Height
BLCA cis rs9815354 1 rs9873207 chr3:41884750 ULK4 chr3:41288091-42003660:- 0.64 9.5 2.29E-19 Diastolic blood pressure
BLCA cis rs9815354 1 rs9874513 chr3:41909508 ULK4 chr3:41288091-42003660:- 0.64 9.5 2.29E-19 Diastolic blood pressure
BLCA cis rs9815354 1 rs9874975 chr3:41764300 ULK4 chr3:41288091-42003660:- 0.63 9.75 3.36E-20 Diastolic blood pressure
BLCA cis rs9815354 1 rs9875083 chr3:41775786 ULK4 chr3:41288091-42003660:- 0.64 9.46 3.23E-19 Diastolic blood pressure
BLCA cis rs9815354 1 rs9875107 chr3:41822313 ULK4 chr3:41288091-42003660:- 0.63 9.67 6.38E-20 Diastolic blood pressure
BLCA cis rs10935120 1 rs9876658 chr3:134179453 ANAPC13 chr3:134196547-134204865:- -0.39 -6.06 3.31E-9 Height
BLCA cis rs9815354 1 rs9876960 chr3:41985812 ULK4 chr3:41288091-42003660:- -0.63 -9.71 4.41E-20 Diastolic blood pressure
BLCA cis rs9876781 1 rs9881491 chr3:48487911 TREX1 chr3:48501186-48509043:+ -0.2 -4.07 5.62E-5 Longevity
BLCA cis rs9815354 1 rs9882329 chr3:41767154 ULK4 chr3:41288091-42003660:- 0.63 9.78 2.69E-20 Diastolic blood pressure